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Submissions from 2023

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Identifying and sharing per-and polyfluoroalkyl substances hot-spot areas and exposures in drinking water, Sweta Ojha, P. Travis Thompson, Christian D. Powell, Hunter N. B. Moseley, and Kelly G. Pennell

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Liver transplantation for biliary cysts: perioperative and long-term outcomes, Gabriel Orozco, Malay B. Shah, Meera Gupta, Francesc Marti, Xiaonan Mei, Alexandre Ancheta, Siddharth Desai, Michael Cavnar, B. Mark Evers, Joseph B. Zwischenberger, and Roberto Gedaly

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Control of CD4+ T cells to restrain inflammatory diseases via eukaryotic elongation factor 2 kinase, Hao-Yun Peng, Liqing Wang, Jugal Kishore Das, Anil Kumar, Darby J. Ballard, Yijie Ren, Xiaofeng Xiong, Paul de Figueiredo, Jin-Ming Yang, and Jianxun Song

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The metabolomics workbench file status website: a metadata repository promoting FAIR principles of metabolomics data, Christian D. Powell and Hunter N. B. Moseley

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PCB126 exposure during pregnancy alters maternal and fetal gene expression, Cetewayo S. Rashid, Joshua D. Preston, Sara Y. Ngo Tenlep, Marissa K. Cook, Eric M. Blalock, Changcheng Zhou, Hollie I. Swanson, and Kevin J. Pearson

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Life stressors and immune aging: Protective effects of cognitive reappraisal, Rebecca G. Reed, Steven R. Presnell, Ahmad Al-Attar, Charles T. Lutz, and Suzanne C. Segerstrom

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Exposure to PCB126 during the nursing period reversibly impacts early-life glucose tolerance, Brittany Breon Rice, Keegan W. Sammons, Sara Y. Ngo Tenlep, Madeline T. Weltzer, Leryn J. Reynolds, Cetewayo S. Rashid, Hollie I. Swanson, and Kevin J. Pearson

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Lung and Colorectal Cancer Disparities in Appalachian Kentucky: Spatial Analysis on the Influence of Education and Literacy, Nicole Robertson MPH, Todd Burus, Lauren Hudson, Pamela C. Hull, Lee Park, and Nathan L. Vanderford

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Development and characterization of nanobodies that specifically target the oncogenic Phosphatase of Regenerating Liver-3 (PRL-3) and impact its interaction with a known binding partner, CNNM3, Caroline N. Smith, Kyle Kihn, Zachary A. Williamson, K. Martin Chow, Louis B. Hersh, Konstantin V. Korotkov, Daniel Deredge, and Jessica S. Blackburn

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Post-intensive care syndrome and pulmonary fibrosis in patients surviving ARDS-pneumonia of COVID-19 and non-COVID-19 etiologies, Jamie L. Sturgill, Kirby Mayer, Anna G. Kalema, Kinjal Dave, Stephanie Mora, Alborz Kalantar, David J. Carter, Ashley A. Montgomery-Yates, and Peter E. Morris

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IFN-γ production by brain-resident cells activates cerebral mRNA expression of a wide spectrum of molecules critical for both innate and T cell-mediated protective immunity to control reactivation of chronic infection with Toxoplasma gondii, Yasuhiro Suzuki, Jenny Lutshumba, Kuey Chu Chen, Mohamed H. Abdelaziz, Qila Sa, and Eri Ochiai

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Long-term kidney function recovery and mortality after COVID-19-associated acute kidney injury: An international multi-centre observational cohort study, Byom W. L. Tan, Bryce W. Q. Tan, Kee Yuan Ngiam, and The Consortium for Clinical Characterization of COVID-19 by EHR (4CE)

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EMT-activated secretory and endocytic vesicular trafficking programs underlie a vulnerability to PI4K2A antagonism in lung cancer, Xiaochao Tan, Guan-Yu Xiao, Shike Wang, Lei Shi, Yanbin Zhao, Xin Liu, Jiang Yu, William K. Russell, Chad J. Creighton, and Jonathan M. Kurie

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Loss of Peroxiredoxin IV Protects Mice from Azoxymethane/Dextran Sulfate Sodium-Induced Colorectal Cancer Development, Pratik Thapa, Hong Jiang, Na Ding, Yanning Hao, Aziza Alshahrani, Eun Young Lee, Junichi Fujii, and Qiou Wei

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MESSES: Software for Transforming Messy Research Datasets into Clean Submissions to Metabolomics Workbench for Public Sharing, P. Travis Thompson and Hunter N. B. Moseley

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A proposed FAIR approach for disseminating geospatial information system maps, P. Travis Thompson, Sweta Ojha, Christian D. Powell, Kelly G. Pennell, and Hunter N. B. Moseley

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An improved germline genome assembly for the sea lamprey Petromyzon marinus illuminates the evolution of germline-specific chromosomes, Nataliya Timoshevskaya, Kaan İ. Eşkut, Vladimir A. Timoshevskiy, Sofia M.C. Robb, Carson Holt, Jon E. Hess, Hugo J. Parker, Cindy F. Baker, Allison K. Miller, Cody Saraceno, Mark Yandell, Robb Krumlauf, Shawn R. Narum, Ralph T. Lampman, Neil J. Gemmell, Jacquelyn Mountcastle, Bettina Haase, Jennifer R. Balacco, Giulio Formenti, Sarah Pelan, Ying Sims, Kerstin Howe, Olivier Fedrigo, Erich D. Jarvis, and Jeramiah James Smith

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The PLOD2/succinate axis regulates the epithelial–mesenchymal plasticity and cancer cell stemness, Yuxin Tong, Yifei Qi, Gaofeng Xiong, Junyan Li, Timothy L. Scott, Jie Chen, Daheng He, Linzhang Li, Chi Wang, Andrew N. Lane, and Ren Xu

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Process intensification strategies for green solvent mediated biomass pretreatment, Ahamed Ullah, Yuxuan Zhang, Can Liu, Qi Qiao, Qing Shao, and Jian Shi

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The Kappa Opioid Receptor Agonist 16-Bromo Salvinorin A Has Anti-Cocaine Effects without Significant Effects on Locomotion, Food Reward, Learning and Memory, or Anxiety and Depressive-like Behaviors, Ross van de Wetering, Amy Ewald, Susan Welsh, Lindsay Kornberger, Samuel E. Williamson, Bryan D. McElroy, Eduardo R. Butelman, Thomas E. Prisinzano, and Bronwyn M. Kivell

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Proteasome inhibition protects blood–brain barrier P-glycoprotein and lowers Aβ brain levels in an Alzheimer’s disease model, Milica Vulin, Yu Zhong, Bryan J. Maloney, Björn Bauer, and Anika M. S. Hartz

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Identification of monotonically expressed long non-coding RNA signatures for breast cancer using variational autoencoders, Dongjiao Wang, Ling Gao, Xinliang Gao, Chi Wang, and Suyan Tian

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NAC1 confines virus‐specific memory formation of CD4+ T cells through the ROCK1‐mediated pathway, Liqing Wang, Hao-Yun Peng, Jugal Kishore Das, Anil Kumar, Yijie Ren, Darby J. Ballard, Xiaofang Xiong, Wen Yang, Xingcong Ren, Paul de Figueiredo, Jin-Ming Yang, and Jianxun Song

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Effects of Interfraction Dose Variations of Target and Organs at Risk on Clinical Outcomes in High Dose Rate Brachytherapy for Cervical Cancer, Brien Washington, Dennis C. Cheek, Denise Fabian, Mahesh R. Kudrimoti, Damodar Pokhrel, Chi Wang, Cameron Thayer-Freeman, and Wei Luo

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Cyclin D1 extensively reprograms metabolism to support biosynthetic pathways in hepatocytes, Heng Wu, Betsy T. Kren, Andrew N. Lane, Teresa A. Cassel, Richard M. Higashi, Teresa Whei-Mei Fan, George S. Scaria, Laurie L. Shekels, Mark A. Klein, and Jeffrey H. Albrecht