Satellite Symposium 5: Molecular Breeding
Description
Association mapping relies on linkage disequilibrium (LD) between haplotypes and quantitative trait loci (QTL). The level of LD in a genome determines the resolution of this approach. In out-breeding species, LD is expected to decay rapidly, thus allowing for high-resolution mapping. It has been most extensively used in human genetics, but recent work with maize populations has demonstrated its potential in plants (Thornsberry et al., 2001; Wilson et al., 2004), and used in L. perenne to identify AFLP markers associated with a major QTL for heading date on linkage group 7 (Skøt et al., 2004). The objective of the present work is to associate allelic variation in candidate genes for heading date and water soluble carbohydrates (WSC) in natural populations of L. perenne with phenotypic variation. Both these traits are important breeding targets in ryegrass.
Citation
Skøt, L.; Humphreys, J.; Armstead, I. P.; Humphreys, M. O.; Gallagher, J. A.; and Thomas, I. D., "Approaches for Associating Molecular Polymorphisms with Phenotypic Traits Based on Linkage Disequilibrium in Natural Populations of Lolium Perenne" (2023). IGC Proceedings (1993-2023). 127.
https://uknowledge.uky.edu/igc/20/satellitesymposium5/127
Included in
Agricultural Science Commons, Agronomy and Crop Sciences Commons, Plant Biology Commons, Plant Pathology Commons, Soil Science Commons, Weed Science Commons
Approaches for Associating Molecular Polymorphisms with Phenotypic Traits Based on Linkage Disequilibrium in Natural Populations of Lolium Perenne
Association mapping relies on linkage disequilibrium (LD) between haplotypes and quantitative trait loci (QTL). The level of LD in a genome determines the resolution of this approach. In out-breeding species, LD is expected to decay rapidly, thus allowing for high-resolution mapping. It has been most extensively used in human genetics, but recent work with maize populations has demonstrated its potential in plants (Thornsberry et al., 2001; Wilson et al., 2004), and used in L. perenne to identify AFLP markers associated with a major QTL for heading date on linkage group 7 (Skøt et al., 2004). The objective of the present work is to associate allelic variation in candidate genes for heading date and water soluble carbohydrates (WSC) in natural populations of L. perenne with phenotypic variation. Both these traits are important breeding targets in ryegrass.
