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Submissions from 2018

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An Epidemiologic Study of Antimicrobial Resistance of Staphylococcus Species Isolated from Equine Samples Submitted to a Diagnostic Laboratory, Ronita Adams, Jackie Smith, Stephen Locke, Erica Phillips, Erdal Erol, Craig N. Carter, and Agricola Odoi

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Downregulation of MicroRNA Eca-Mir-128 in Seminal Exosomes and Enhanced Expression of CXCL16 in the Stallion Reproductive Tract Are Associated with Long-Term Persistence of Equine Arteritis Virus, Mariano Carossino, Pouya Dini, Theodore S. Kalbfleisch, Alan T. Loynachan, Igor F. Canisso, Kathleen M. Shuck, Peter J. Timoney, R. Frank Cook, and Udeni B. R. Balasuriya

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In Vivo Structures of the Helicobacter pylori cag Type IV Secretion System, Yi-Wei Chang, Carrie L. Shaffer, Lee A. Rettberg, Debnath Ghosal, and Grant J. Jensen

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In Vivo and In Vitro Studies of Cry5B and Nicotinic Acetylcholine Receptor Agonist Anthelmintics Reveal a Powerful and Unique Combination Therapy Against Intestinal Nematode Parasites, Yan Hu, Melanie Miller, Bo Zhang, Thanh-Thanh Nguyen, Martin K. Nielsen, and Raffi V. Aroian

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Horse Y Chromosome Assembly Displays Unique Evolutionary Features and Putative Stallion Fertility Genes, Jan E. Janečka, Brian W. Davis, Sharmila Ghosh, Nandina Paria, Pranab J. Das, Ludovic Orlando, Mikkel Schubert, Martin K. Nielsen, Tom A. E. Stout, Wesley Brashear, Gang Li, Charles D. Johnson, Richard P. Metz, Al Muatasim Al Zadjali, Charles C. Love, Dickson D. Varner, Daniel W. Bellott, William J. Murphy, Bhanu P. Chowdhary, and Terje Raudsepp

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Improved Reference Genome for the Domestic Horse Increases Assembly Contiguity and Composition, Theodore S. Kalbfleisch, Edward S. Rice, Michael S. DePriest Jr., Brian P. Walenz, Matthew S. Hestand, Joris R. Vermeesch, Brendan L. O'Connell, Ian T. Fiddes, Alisa O. Vershinina, Nedda F. Saremi, Jessica L. Petersen, Carrie J. Finno, Rebecca R. Bellone, Molly E McCue, Samantha A. Brooks, Ernest Bailey, Ludovic Orlando, Richard E. Green, Donald C. Miller, Douglas F. Antczak, and James N. Macleod

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iMapSplice: Alleviating Reference Bias Through Personalized RNA-seq Alignment, Xinan Liu, James N. MacLeod, and Jinze Liu

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Characterization of mRNA Polyadenylation in the Apicomplexa, Ashley T. Stevens, Daniel K. Howe, and Arthur G. Hunt

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Serum Lipidomics of Bovine Paratuberculosis: Disruption of Choline-Containing Glycerophospholipids and Sphingolipids, Paul L. Wood, Erdal Erol, Glen F. Hoffsis, Margaret Steinman, and Jeroen DeBuck

Submissions from 2017

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Seroepidemiology of Sarcocystis neurona and Neospora hughesi Infections in Domestic Donkeys (Equus asinus) in Durango, Mexico, Cosme Alvarado-Esquivel, Daniel K. Howe, Michelle R. Yeargan, Domingo Alvarado-Esquivel, José Alfredo Zamarripa-Barboza, and Jitender P. Dubey

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Genetic Signatures for Helicobacter pylori Strains of West African Origin, Kennady K. Bullock, Carrie L. Shaffer, Andrew W. Brooks, Ousman Secka, Mark H. Forsyth, Mark S. McClain, and Timothy L. Cover

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Evaluation of a Field-Deployable Reverse Transcription-Insulated Isothermal PCR for Rapid and Sensitive On-Site Detection of Zika Virus, Mariano Carossino, Yanqiu Li, Pei-Yu A. Lee, Chuan-Fu Tsai, Pin-Hsing Chou, Dennis Williams, Ashley Skillman, R. Frank Cook, Grayson Brown, Hsiao-Fen G. Chang, Hwa-Tang T. Wang, and Udeni B. R. Balasuriya

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Equine Arteritis Virus Has Specific Tropism for Stromal Cells and CD8+ T and CD21+ B Lymphocytes but Not for Glandular Epithelium at the Primary Site of Persistent Infection in the Stallion Reproductive Tract, Mariano Carossino, Alan T. Loynachan, Igor F. Canisso, Richard Frank Cook, Juliana Roberta Campos, Bora Nam, Yun Young Go, Edward L. Squires, Mats H. T. Troedsson, Thomas W. Swerczek, Fabio Del Piero, Ernest F. Bailey, Peter J. Timoney, and Udeni B. R. Balasuriya

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Equine Arteritis Virus Elicits a Mucosal Antibody Response in the Reproductive Tract of Persistently Infected Stallions, Mariano Carossino, Bettina Wagner, Alan T. Loynachan, R. Frank Cook, Igor F. Canisso, Lakshman Chelvarajan, Casey L. Edwards, Bora Nam, John F. Timoney, Peter J. Timoney, and Udeni B. R. Balasuriya

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Differential Roles for Inner Membrane Complex Proteins Across Toxoplasma gondii and Sarcocystis neurona Development, Rashmi Dubey, Brooke Harrison, Sriveny Dangoudoubiyam, Giulia Bandini, Katherine Cheng, Aziz Kosber, Carolina Agop-Nersesian, Daniel K. Howe, John Samuelson, David J. P. Ferguson, and Marc-Jan Gubbels

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A Serosurvey of Selected Cystogenic Coccidia in Spanish Equids: First Detection of Anti-Besnoitia spp. Specific Antibodies in Europe, Daniel Gutiérrez-Expósito, Ignacio García-Bocanegra, Daniel K. Howe, Antonio Arenas-Montes, Michelle R. Yeargan, SallyAnne L. Ness, Luis M Ortega-Mora, and G. Álvarez-García

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Detection of Strongylus vulgaris in Equine Faecal Samples by Real-Time PCR and Larval Culture – Method Comparison and Occurrence Assessment, A. Kaspar, K. Pfister, Martin K. Nielsen, C. Silaghi, H. Fink, and M. C. Scheuerle

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Evaluation of Circulating miRNAs During Late Pregnancy in the Mare, Shavahn C. Loux, Kirsten E. Scoggin, Jason E. Bruemmer, Igor F. Canisso, Mats H. T. Troedsson, Edward L. Squires, and Barry A. Ball

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Evaluation of Six Serological ELISA Kits Available in Italy as Screening Tests for Equine Infectious Anaemia Surveillance, Roberto Nardini, Gian Luca Autorino, Charles J. Issel, Richard F. Cook, Ida Ricci, Raffaele Frontoso, Francesca Rosone, and Maria Teresa Scicluna

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Developing a 670k Genotyping Array to Tag ~2M SNPs Across 24 Horse Breeds, Robert J. Schaefer, Mikkel Schubert, Ernest F. Bailey, Danika L. Bannasch, Eric Barrey, Gila Kahila Bar-Gal, Gottfried Brem, Samantha A. Brooks, Ottmar Distl, Ruedi Fries, Carrie J. Finno, Vinzenz Gerber, Bianca Haase, Vidhya Jagannathan, Ted Kalbfleisch, Tosso Leeb, Gabriella Lindgren, Maria Susana Lopes, Núria Mach, Artur da Câmara Machado, James N. Macleod, Annette McCoy, Julia Metzger, Cecilia Penedo, Sagi Polani, Stefan Rieder, Imke Tammen, Jens Tetens, Georg Thaller, and Andrea Verini-Supplizi

Submissions from 2016

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Local Admixture of Amplified and Diversified Secreted Pathogenesis Determinants Shapes Mosaic Toxoplasma gondii Genomes, Hernan Lorenzi, Asis Khan, Michael S. Behnke, Sivaranjani Namasivayam, Lakshmipuram S. Swapna, Michalis Hadjithomas, Svetlana Karamycheva, Deborah Pinney, Brian P. Brunk, James W. Ajioka, Daniel Ajzenberg, John C. Boothroyd, Jon P. Boyle, Marie L. Dardé, Maria A. Diaz-Miranda, Jitender P. Dubey, Heather M. Fritz, Solange M. Gennari, Brian D. Gregory, Kami Kim, Jeroen P. J. Saeij, Chunlei Su, Michael W. White, Xing-Quan Zhu, Daniel K. Howe, Benjamin M. Rosenthal, Michael E. Grigg, John Parkinson, Liang Liu, and Jessica C. Kissinger

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Equine Protozoal Myeloencephalitis: An Updated Consensus Statement with a Focus on Parasite Biology, Diagnosis, Treatment, and Prevention, S. M. Reed, M. Furr, Daniel K. Howe, A. L. Johnson, R. J. MacKay, J. K. Morrow, N. Pusterla, and S. Witonsky

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Allelic Variation in CXCL16 Determines CD3+ T Lymphocyte Susceptibility to Equine Arteritis Virus Infection and Establishment of Long-Term Carrier State in the Stallion, Sanjay Sarkar, Ernest Bailey, Yun Young Go, R. Frank Cook, Ted Kalbfleisch, John E. Eberth, R. Lakshman Chelvarajan, Kathleen M. Shuck, Sergey Artiushin, Peter J. Timoney, and Udeni B. R. Balasuriya

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Equine Arteritis Virus Uses Equine CXCL16 as an Entry Receptor, Sanjay Sarkar, Lakshman Chelvarajan, Yun Young Go, Frank Cook, Sergey Artiushin, Shankar Mondal, Kelsi Anderson, John E. Eberth, Peter J. Timoney, Theodore S. Kalbfleisch, Ernest F. Bailey, and Udeni B. R. Balasuriya

Submissions from 2015

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Systems-Based Analysis of the Sarcocystis neurona Genome Identifies Pathways That Contribute to a Heteroxenous Life Cycle, Tomasz Blazejewski, Nirvana Nursimulu, Viviana Pszenny, Sriveny Dangoudoubiyam, Sivaranjani Namasivayam, Melissa A. Chiasson, Kyle Chessman, Michelle Tonkin, Lakshmipuram S. Swapna, Stacy S. Hung, Joshua Bridgers, Stacy M. Ricklefs, Martin J. Boulanger, Jitender P. Dubey, Stephen F. Porcella, Jessica C. Kissinger, Daniel K. Howe, Michael E. Grigg, and John Parkinson