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Submissions from 2018

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Does the Foundational Model of Anatomy Ontology Provide a Knowledge Base for Learning and Assessment in Anatomy Education?, Melissa D. Clarkson and Mark E. Whipple

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Auditing SNOMED CT Hierarchical Relations Based on Lexical Features of Concepts in Non-Lattice Subgraphs, Licong Cui, Olivier Bodenreider, Jay Shi, and Guo-Qiang Zhang

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X-search: An Open Access Interface for Cross-Cohort Exploration of the National Sleep Research Resource, Licong Cui, Ningzhou Zeng, Matthew Kim, Remo Mueller, Emily Ruth Hankosky, Susan Redline, and Guo-Qiang Zhang

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Analysis of College Students’ Personal Health Information Activities: Online Survey, Sujin Kim, Donghee Sinn, and Sue Yeon Syn

Submissions from 2017

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Mining Non-Lattice Subgraphs for Detecting Missing Hierarchical Relations and Concepts in SNOMED CT, Licong Cui, Wei Zhu, Shiqiang Tao, James T. Case, Olivier Bodenreider, and Guo-Qiang Zhang

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The Influence of a KDT501, a Novel Isohumulone, on Adipocyte Function in Humans, Brian S. Finlin, Beibei Zhu, Bernard P. Kok, Cristina Godio, Philip M. Westgate, Neile Grayson, Robert Sims, Jeffrey S. Bland, Enrique Saez, and Philip A. Kern

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Image-Based Analysis to Dissect Vertical Distribution and Horizontal Asymmetry of Conspecific Root System Interactions in Response to Planting Densities, Nutrients and Root Exudates in Arabidopsis thaliana, Jane Geisler-Lee, Xian Liu, Wei Rang, Jayanthan Raveendiran, Marisa Blake Szubryt, David John Gibson, Matt Geisler, and Qiang Cheng

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HyCLASSS: A Hybrid Classifier for Automatic Sleep Stage Scoring, Xiaojin Li, Licong Cui, Shiqiang Tao, Jing Chen, Xiang Zhang, and Guo-Qiang Zhang

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Integrated Biomarker Profiling of Smokers with Periodontitis, Radhakrishnan Nagarajan, Mohanad Al-Sabbagh, Dolph Dawson III, and Jeffrey L. Ebersole

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Cross-Talk Between Clinical and Host-Response Parameters of Periodontitis in Smokers, Radha Nagarajan, Craig S. Miller, Dolph R. Dawson III, Mohanad Al-Sabbagh, and Jeffrey L. Ebersole

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Predicting Disease-Related Genes Using Integrated Biomedical Networks, Jiajie Peng, Kun Bai, Xuequn Shang, Guohua Wang, Hansheng Xue, Shuilin Jin, Liang Cheng, Yadong Wang, and Jin Chen

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Ordinal Convolutional Neural Networks for Predicting RDoC Positive Valence Psychiatric Symptom Severity Scores, Anthony Rios and Ramakanth Kavuluru

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A Fast and Efficient Python Library for Interfacing with the Biological Magnetic Resonance Data Bank, Andrey Smelter, Morgan Astra, and Hunter N. B. Moseley

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Detecting and Accounting for Multiple Sources of Positional Variance in Peak List Registration Analysis and Spin System Grouping, Andrey Smelter, Eric C. Rouchka, and Hunter N. B. Moseley

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Predicting Mental Conditions Based on "History of Present Illness" in Psychiatric Notes with Deep Neural Networks, Tung Tran and Ramakanth Kavuluru

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Hypothesis of K+-Recycling Defect Is Not a Primary Deafness Mechanism for Cx26 (GJB2) Deficiency, Hong-Bo Zhao

Submissions from 2016

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Automated Quality Control for Genome Wide Association Studies, Sally R. Ellingson and David W. Fardo

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S100A4 Drives Non-Small Cell Lung Cancer Invasion, Associates with Poor Prognosis, and is Effectively Targeted by the FDA-Approved Anti-Helminthic Agent Niclosamide, Rachel L. Stewart, Brittany L. Carpenter, Dava S. West, Teresa Knifley, Lili Liu, Chi Wang, Heidi L. Weiss, Tamas S. Gal, Eric B. Durbin, Susanne M. Arnold, Kathleen L. O'Connor, and Min Chen

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Elevated Integrin α6β4 Expression is Associated with Venous Invasion and Decreased Overall Survival in Non-Small Cell Lung Cancer, Rachel L. Stewart, Dava West, Chi Wang, Heidi L. Weiss, Tamas S. Gal, Eric B. Durbin, William O'Connor, Min Chen, and Kathleen L. O'Connor

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FEDRR: Fast, Exhaustive Detection of Redundant Hierarchical Relations for Quality Improvement of Large Biomedical Ontologies, Guangming Xing, Guo-Qiang Zhang, and Licong Cui

Submissions from 2015

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Gene Expression During the First 28 Days of Axolotl Limb Regeneration I: Experimental Design and Global Analysis of Gene Expression, S. Randal Voss, Alex Palumbo, Radha Nagarajan, David M. Gardiner, Ken Muneoka, Arnold J. Stromberg, and Antony T. Athippozhy

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NHash: Randomized N-Gram Hashing for Distributed Generation of Validatable Unique Study Identifiers in Multicenter Research, Guo-Qiang Zhang, Shiqiang Tao, Guangming Xing, Jeno Mozes, Bilal Zonjy, Samden D. Lhatoo, and Licong Cui

Submissions from 2011

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A Comparison of Intensive Care Unit Mortality Prediction Models through the Use of Data Mining Techniques, Sujin Kim, Woojae Kim, and Rae Woong Park