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Submissions from 2016

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From Damage to Discovery Via Virtual Unwrapping: Reading the Scroll from En-Gedi, W. Brent Seales, Clifford S. Parker, Michael Segal, Emanuel Tov, Pnina Shor, and Yosef Porath

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A Colletotrichum graminicola Mutant Deficient in the Establishment of Biotrophy Reveals Early Transcriptional Events in the Maize Anthracnose Disease Interaction, Maria F. Torres, Noushin Ghaffari, Ester A. S. Buiate, Neil Moore, Scott Schwartz, Charles D. Johnson, and Lisa J. Vaillancourt

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FEDRR: Fast, Exhaustive Detection of Redundant Hierarchical Relations for Quality Improvement of Large Biomedical Ontologies, Guangming Xing, Guo-Qiang Zhang, and Licong Cui

Submissions from 2015

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Smart Sensing and Mobile Computing, Guihai Chen, Dakshnamoorthy Manivannan, Chen Qian, Fangming Liu, and Jinsong Han

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Annotation of the Protein Coding Regions of the Equine Genome, Matthew S. Hestand, Theodore S. Kalbfleisch, Stephen J. Coleman, Zheng Zeng, Jinze Liu, Ludovic Orlando, and James N. MacLeod

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Tissue Restricted Splice Junctions Originate Not Only from Tissue-Specific Gene Loci, but Gene Loci with a Broad Pattern of Expression, Matthew S. Hestand, Zheng Zeng, Stephen J. Coleman, Jinze Liu, and James N. MacLeod

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Large-Scale Geo-Facial Image Analysis, Mohammed T. Islam, Connor Greenwell, Richard Souvenir, and Nathan Jacobs

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Genetics, Genomics and Evolution of Ergot Alkaloid Diversity, Carolyn A. Young, Christopher L. Schardl, Daniel G. Panaccione, Simona Florea, Johanna E. Takach, Nikki D. Charlton, Neil Moore, Jennifer S. Webb, and Jolanta Jaromczyk

Submissions from 2014

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Piecing the Puzzle Together: A Revisit to Transcript Reconstruction Problem in RNA-Seq, Yan Huang, Yin Hu, and Jinze Liu

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The Effects of Using Chaotic Map on Improving the Performance of Multiobjective Evolutionary Algorithms, Hui Lu, Xiaoteng Wang, Zongming Fei, and Meikang Qiu

Submissions from 2013

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BlackOPs: Increasing Confidence in Variant Detection Through Mappability Filtering, Christopher R. Cabanski, Matthew D. Wilkerson, Matthew Soloway, Joel S. Parker, Jinze Liu, Jan F. Prins, J. S. Marron, Charles M. Perou, and D. Neil Hayes

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Analysis of unannotated equine transcripts identified by mRNA sequencing, Stephen J. Coleman, Zheng Zeng, Matthew S. Hestand, Jinze Liu, and James N. Macleod

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DiffSplice: The Genome-Wide Detection of Differential Splicing Events with RNA-Seq, Yin Hu, Yan Huang, Ying Du, Christian F. Orellana, Darshan Singh, Amy R. Johnson, Anaïs Monroy, Pei-Fen Kuan, Scott M. Hammond, Liza M. Hammond, Scott H. Randell, Derek Y. Chiang, D. Neil Hayes, Corbin Jones, Yufeng Liu, Jan F. Prins, and Jinze Liu

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Plant-symbiotic fungi as chemical engineers: multi-genome analysis of the clavicipitaceae reveals dynamics of alkaloid loci, Christopher L. Schardl, Carolyn A. Young, Uljana Hesse, Stefan G. Amyotte, Kalina Andreeva, Patrick J. Calie, Damien J. Fleetwood, David C. Haws, Neil Moore, Birgitt Oeser, Daniel G. Panaccione, Kathryn K. Schweri, Christine R. Voisey, Mark L. Farman, Jerzy W. Jaromczyk, Bruce A. Roe, Donal M. O'Sullivan, Barry Scott, Paul Tudzynski, Zhiqiang An, Elissaveta G. Arnaoudova, Charles T. Bullock, Nikki D. Charlton, Li Chen, Murray Cox, Randy D. Dinkins, Simona Florea, Anthony E. Glenn, Anna Gordon, Ulrich Güldener, Daniel R. Harris, Walter Hollin, Jolanta Jaromczyk, Richard D. Johnson, Anar K. Khan, Eckhard Leistner, Adrian Leuchtmann, Chunjie Li, JinGe Liu, Jinze Liu, Miao Liu, Wade Mace, Caroline Machado, Padmaja Nagabhyru, Juan Pan, Jan Schmid, Koya Sugawara, Ulrike Steiner, Johanna E. Takach, Eiji Tanaka, Jennifer S. Webb, Ella V. Wilson, Jennifer L. Wiseman, Ruriko Yoshida, and Zheng Zeng

Submissions from 2011

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Exploration and comparison of methods for combining population- and family-based genetic association using the Genetic Analysis Workshop 17 mini-exome, David W. Fardo, Anthony R. Druen, Jinze Liu, Lucia Mirea, Claire Infante-Rivard, and Patrick Breheny

Submissions from 2010

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MapSplice: Accurate Mapping of RNA-Seq Reads for Splice Junction Discovery, Kai Wang, Darshan Singh, Zheng Zeng, Stephen J. Coleman, Yan Huang, Gleb L. Savich, Xiaping He, Piotr Mieczkowski, Sara A. Grimm, Charles M. Perou, James N. Macleod, Derek Y. Chiang, Jan F. Prins, and Jinze Liu

Submissions from 2009

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What Your Teacher Told You is True: Latin Verbs Have Four Principal Parts, Raphael Finkel and Gregory Stump

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3D Medical Collaboration Technology to Enhance Emergency Healthcare, Greg Welch, Diane H. Sonnenwald, Henry Fuchs, Bruce Cairns, Ketan Mayer-Patel, Hanna M. Söderholm, Ruigang Yang, Andrei State, Herman Towles, Adrian Ilie, Manoj Ampalam, Srinivas Krishnan, Vincent Noel, Michael Noland, and James E. Manning

Submissions from 2007

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Generating Hebrew Verb Morphology by Default Inheritance Hierarchies, Raphael Finkel and Gregory Stump

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Principal Parts and Morphological Typology, Raphael Finkel and Gregory Stump

Submissions from 2003

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An Additive Schwarz Preconditioner for the Spectral Element Ocean Model Formulation of the Shallow Water Equations, Craig C. Douglas, Gundolf Haase, and Mohamed Iskandarani

Submissions from 2000

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On Preconditioning Schur Complement and Schur Complement Preconditioning, Jun Zhang